Recommending how balanced scorecard comes into being and its basic framework,dissertating the operation significance of introducing balanced scorecard aiming at the status quo of enterprise restructured from scientific institution,we,then,put forward problems should be paid more attention to during the process of introducing balanced scorecard.

Along with scientific research system reformed,the precision instrument managers in the reformed academy are faced with much difficulty.

By analyzing the present situations of the scientific institute-invested enterprises, the paper explores the development bottle-neck encountered by the scientific institute-invested enterprises, and the inevitable tendency of the socialization of the scientific institute -invested enterprises shareholding right.